Publications
Peer-Reviewed Scientific Papers
*indicates articles published by mentee.
26. Qu, Z.; Grimson, M.; Mao, Y.; Heilpern, S.; Miqueleiz, I.; Pacheco, F. S.; Flecker, A.; Gomes, C. P. Strategies for Compressing the Pareto Frontier: Application to Strategic Planning of Hydropower in the Amazon Basin. International Conference on the Integration of Constraint Programming, Artificial Intelligence, and Operations Research. 141-157, 2024.
​
25. Grimson, M.; Almeida, R.; Shi, Q.; Bai, Y.; Angarita, H.; Pacheco, F. S.; Schmitt, R.; Flecker, A.; Gomes, C. P. Scaling up pareto optimization for tree structures with affine transformations: Evaluating hybrid floating solar-hydropower systems in the amazon. Proceedings of the AAAI Conference on Artificial Intelligence. 38(20): 22067-22075, 2024
​
24. Greenstreet, L.; Fan, J.; Pacheco, F. S.; Bai, Y.; Ummus, M. E.; Doria, C.; Barros, N. O.; Forsberg, B. R.; Xu, X.; Flecker, A.; Gomes, C. Detecting aquaculture with deep learning in a low-data setting.. SIGKDD Fragile Earth, 2023.
​
23. *Reis, A.; Pacheco, F. S.; Pimenta, F. M.; Passos, R. B.; Fisch, J.; Mendonça, J. C.; Assireu, A. T. Effects of atmospheric low-level jets on the mixing process of a large tropical reservoir. An Acad Bras Cienc. 95 (Suppl. 1): e20211594, 2023.
22. van Grinsven, H. J. M.; Ebanyat, P.; Glendining, M.; Gu, B.; Hijbeek, R.; Lam, S. K.; Lassaletta, L.; Mueller, N. D.; Pacheco, F. S.; Quemada, M.; Bruulsema, T. W.; Jacobsen, B. H.; ten Berge, H. F. M. Establishing long-term nitrogen response of global cereals to assess sustainable fertilizer rates. Nature Food 3, 122–132, 2022.
21. Graco-Roza, C., Aarnio, S., Abrego, N., ..., Pacheco, F. S. et al.. Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities. Global Ecology and Biogeography, 31, 1399– 1421, 2022.
​
20. Pacheco, F. S.; Ometto, J. P. H. B.; Gomes, L.; Tôsto, K.; Miranda, M.; Loverde-Oliveira, S.; Pessi, D. D.; Cox, C., Nutrient balance and use efficiency in agricultural lands in the Vermelho River watershed, Upper Pantanal, Brazil. Journal of Geophysical Research: Biogeosciences, 126e2020JG005673, 2021.
​
19. *Miranda, M.; Marinho, M. M.; Noyma, N.; Huszar, V. L. M.; van Oosterhout, F.; Lürling, M.; Ometto, J. P.; Pacheco, F. S. Phosphorus balance in a tropical shallow urban pond in Southeast Brazil: implications for eutrophication management. Inland Waters, 2021.
​
18. *Reis, C. R. G.; Pacheco, F. S.; Reed, S. C.; Tejada, G.; Nardoto, G. B.; Forti, M. C.; and Ometto, J.P., Biological nitrogen fixation across major biomes in Latin America: Patterns and global change effects. Sci Total Environ, 746, 140998, 2020.
​
17. *de Almeida Souza, M.; Pacheco, F. S.; Palandi, J. A. L.; Forti, M. C.; Campos, M. L. A. M.; Ometto, J. P. H.B.; Reis, D. C. O.; de Carvalho Junior, J. A., Atmospheric concentrations and dry deposition of reactive nitrogen in the state of São Paulo, Brazil. Atmospheric Environment, 230, 117502, 2020.
​
16. *Ribeiro, K.; Pacheco, F. S.; Ferreira, J. W.; Sousa-Neto, E. R. d.; Hastie, A.; Filho, G. C. K.; Alvalá, P. C.; Forti, M. C.; and Ometto, J. P., Tropical peatlands and their contribution to the global carbon cycle and climate change, Glob Change Biol. 2021; 27: 489– 505, 2020.
​
15. Graco-Roza, C.; Soininen, J.; Corrêa, G.; Pacheco, F. S.; Miranda, M.; Domingos, P.; and Marinho, M. M., Functional rather than taxonomic diversity reveals changes in the phytoplankton community of a large dammed river, Ecol Indic. 121, 107048, 2020.
​
14. *Tôsto, K. L.; Pacheco, F. S.; Gomes, L.; Miranda, M.; Oliveira, S. M. L.; Pessi, D. D.; ... & Ometto, J. P. H. B., Nitrogen Use Efficiency: a local and regional approach for Brazilian agriculture. Raega-O Espaço Geográfico em Análise, 46(3): 125-139, 2019
​
13. Oliveira, R.R.; Pezzi, L.P.; Souza, R.B.; Santini, M.F.; Cunha, L.C.; Pacheco, F.S., First measurements of the ocean-atmosphere CO2 fluxes at the Cabo Frio upwelling system region, southwestern Atlantic Ocean. Continental Shelf Research, v. 181: 135-142, 2019
​
12. Campos, R., A. N.; Moreira, F., A; Pacheco, F. S.; Azevedo, G., C.;' Matos, M. A. C., Matos, R. C., Electrochemical Determination of Sunscreens Agents in Cosmetic Using Square Wave Voltammetry. Electroanalysis, v. 30: 1-9, 2018
​
11. Pacheco, F. S.; Miranda, M.; Pezzi, L.; Marinho, M. M.; Malafaia, M.; Reis, A.; Sales, M.; Correia, G.; Domingos, P.; Iwama, A. Y.; Rudorff, C.; Oliva., P.; and Ometo, J. P.: Water quality longitudinal profile of the Paraíba do Sul River, Brazil during an extreme drought event, Limnol Oceanogr, 62: S131-S146, 2017.
​
10. Miranda, M., Noyma, N., Pacheco, F. S., de Magalhães, L., Pinto, E., Santos, S., Soares, M. F. A., Huszar, V. L., Lürling, M., and Marinho, M. M.: The efficiency of combined coagulant and ballast to remove harmful cyanobacterial blooms in a tropical shallow system, Harmful Algae, v. 65, p. 27-39, 2017.
​
9. Almeida, R. M.; Pacheco, F. S.; Barros, N. O.; Rosi, E.; Roland, F. Extreme floods increase CO outgassing from a large Amazonian river. Limnology and Oceanography, 62: 989- 999, 2017.
​
8. Pacheco, F. S.; Miranda, M.; Ometto, J. P.; Assireu, A. T.; Pezzi, L. P. Waterfall project: sport, science and society coming together. Limnology and oceanography bulletin, v. 4, p. 1- 6, 2016.
​
7. Pacheco, F. S.; Soares, M. C. S.; Assireu, A. T.; Curtarelli, M. P.; Abril, G.; Stech, J. L.; Alvalá, P. C.; Ometto, J. P. The effects of river inflow and retention time on the spatial heterogeneity of chlorophyll and water-air CO2 fluxes in a tropical hydropower reservoir. Biogeosciences, v. 12, p. 147-162, 2015.
​
6. Bustamante, M. M. C.; Martinelli, L. A.; Pérez, T.; Rasse, R.; Ometto, J.; Pacheco, F. S.; Lins, S. R. M.; Marquina, S. Nitrogen management challenges in major watersheds of South America. Environmental Research Letters, v. 10, p. 065007, 2015.
​
5. Pacheco, F. S.; Roland, F.; Downing, J. A. Eutrophication reverses whole-lake carbon budgets. Inland Waters, v. 4, p. 41-48, 2014. DOI: 10.5268/iw-4.1.614, 2014.
​
4. Pacheco, F. S., Soares, M. C. S., Assireu, A. T., Curtarelli, M. P., Roland, F., Abril, G., Stech, J. L., Alvalá, P. C., and Ometto, J. P. River inflow and retention time affecting spatial heterogeneity of chlorophyll and water–air CO2 fluxes in a tropical hydropower reservoir, Biogeosciences Discuss., 11, 8531-8568, 2014.
​
3. Assireu, A. T.; Alcantara, E. H.; Novo, E. M. L. M.; Roland, F.; Pacheco, F. S.; Stech, J. L.; Lorenzzentti, J. A. Inside the hydro-physics processes at the plunge point location: an analysis by satellite and in situ data. Hydrology and Earth System Sciences Discussions (Print), v. 8, p. 1193-1223, 2011.
​
2. Assireu, A. T.; Alcântara, E.; Novo, E. M. L. M.; ROLAND, F.; Pacheco, F. S.; Stech, J. L.; Lorenzzetti, J. A. Hydro-physical processes at the plunge point: an analysis using satellite and in situ data. Hydrology and Earth System Sciences, v. 15, p. 3689-3700, 2011.
​
1. Roland, F.; Vidal, L. O.; Pacheco, F. S.; Barros, N.O.; Assireu, A.; Ometto, J. P. H. B.; Cimbleris, A. C. P.; Cole, J. J. Variability of carbon dioxide flux from tropical (Cerrado)hydroelectric reservoirs. Aquatic Sciences, v. 1, p. 1, 2010.
Book Chapter
10. Pacheco, F. S.; Ometto, J. O. Chapter 20: Assessment of nitrogen flows, impact and solutions in Latin America. In. International Nitrogen Assessment. Cambridge University Press. 2023.
9. Ometto, J. O.; Pacheco, F. S.; Almeida, M.; Basso, L.; Bezerra, F. G.; Cardoso, M.; Miranda, M.; Souza-Neto, E.; von Randow, C.; Rezende, L. F.; Ribeiro, K.; Cunha-Zeri, G. Chapter 8: Tropical ecosystem greenhouse gas accounting. In. Balancing Greenhouse Gas Budgets: Accounting for Natural and Anthropogenic Flows of CO2 and other Trace Gases. Elsevier. 2022.
8. Ometto, J.P., Ascarrunz, N.L., Austin, A.T., Bustamante, M.M., Cunha-Zeri, G., Forti, M.C., Hoelzemann, J., Jaramillo, V.J., Martinelli, L.A., Pacheco, F. S., Perez, C., Perez, T., Stein, A. The Latin America Regional Nitrogen Centre: Concepts and Recent Activities. Springer International Publishing, pp. 499-514. 2020
7. de Sousa-Neto, E. R.; Gomes, L.; Nascimento, N.; Pacheco, F. S.; Ometto, J. P.. Land Use and Land Cover Transition in Brazil and Their Effects on Greenhouse Gas Emissions. In: Maria Munoz; Raúl Zornoza. (Org.). Soil Management and Climate Change. 1ed.: Elsevier, p. 309-321, 2018.
6. Assireu, A.; Pacheco, F. S.; Baldini, C. Estimating Particle Dispersion and Reservoir Transport Processes from Satellite Tracked Drifters Data: Methodology and Applications. In: Enner Alcântara (Ed.). Remote Sensing: Techniques, Applications and Technologies 1ed. Nova Science Publisher, p. 93-122.
5. Mendonça, R.; Barros, N. O.; Vidal, L. O.; Pacheco, F. S.; Kosten, S.; Roland, F. Greenhouse Gas Emissions from Hydroelectric Reservoirs: What Knowledge Do We Have and What is Lacking?. Greenhouse Gases - Emission, Measurement and Management. 1ed.: InTech, 2012, p. 56-78. DOI: 10.5772/32752.
4. Pacheco, F. S.; Assireu, A. T.; Roland, F. Derivadores rastreados por satélite aplicados a ambientes aquáticos continentais: caso do Reservatório de Manso. In: Enner Herenio Alcântara; Evlyn Márcia Leão de Moraes Novo; José Luiz Stech. (Org.). Novas tecnologias para o monitoramento e estudo de reservatórios hidrelétricos e grandes lagos. 1ed.São José dos Campos: Parêntese, v. 1, p. 328., 2011
3. Ometto, J. P. H. B.; Pacheco, F. S.; Cimbleris, A. C. P.; Stech, J. L.; Lorenzzentti, J. A.; Assireu, A. T.; Santos, M. A.; Matvienko, B.; Rosa, L. P.; Tundisi, J. G.; Barros, N. O.; Mendonça, R.; Roland, F. Carbon Dynamic and Emissions in Brazilian Hydropower Reservoirs. In: Enner Herenio Alcântara. (Org.). Energy Resources: Development, Distribution, and Exploitation. : Nova Science Publishers, v. 1, p. 244, 2011.
​
2. Roland, F.; Ometto, J. P. H. B.; Barros, N.O.; Pacheco, F. S.; Mendonça, R.; Assireu, A.; Martinelli, L. Importance of tropics to global carbon cycle. Encyclopedia of Life Support Systems.: p. 1-7, 2009.
1. Assireu, A.; Stech, J. L.; Marinho, M. M.; Cesar, D. E.; Lorenzzentti, J. A.; Ferreira, R. M.; Pacheco, F. S.; Roland, F. Princípios Físicos e Químicos a Serviço da Limnologia - Um Exercício In: Lições de Limnologia. 1 ed. São Carlos: Rima Editora, v.1, p. 487- 505, 2005.